Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN04488505_10637 | Not Available | Negative | 5468803 - 5471133 | 87295.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10638 | Not Available | Negative | 5471213 - 5472454 | 46800.2 |
| ycii-related domain-containing protein | SAMN04488505_10639 | Not Available | Negative | 5472509 - 5472856 | 12816.5 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488505_10640 | Not Available | Negative | 5472925 - 5473377 | 17051.0 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04488505_10641 | Not Available | Negative | 5473502 - 5475085 | 59048.2 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488505_10642 | Not Available | Negative | 5475244 - 5476317 | 41287.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488505_10643 | Not Available | Positive | 5476796 - 5477875 | 39701.3 |
| hypothetical protein | SAMN04488505_10644 | Not Available | Negative | 5477881 - 5478255 | 14092.4 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488505_10645 | Not Available | Negative | 5478286 - 5478696 | 15538.4 |
| arac-type dna-binding protein | SAMN04488505_10646 | Not Available | Positive | 5478861 - 5479751 | 35134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
