Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04488505_10617 | Not Available | Negative | 5443162 - 5445114 | 74132.9 |
| cytidylate kinase | SAMN04488505_10618 | Not Available | Negative | 5445775 - 5446467 | 26217.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10619 | Not Available | Negative | 5446800 - 5448413 | 59441.7 |
| hypothetical protein | SAMN04488505_10620 | Not Available | Negative | 5448435 - 5450627 | 77261.8 |
| hypothetical protein | SAMN04488505_10621 | Not Available | Negative | 5450723 - 5452366 | 55948.5 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04488505_10622 | Not Available | Negative | 5453044 - 5455578 | 95136.6 |
| hypothetical protein | SAMN04488505_10623 | Not Available | Positive | 5455817 - 5456191 | 14182.2 |
| ribonuclease z | SAMN04488505_10624 | Not Available | Positive | 5456448 - 5457356 | 34303.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488505_10625 | Not Available | Negative | 5457828 - 5458706 | 31793.5 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | SAMN04488505_10626 | Not Available | Negative | 5458771 - 5459724 | 35769.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
