Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04488505_1067 | Not Available | Negative | 5428786 - 5429379 | 22150.9 |
| uroporphyrinogen-iii c-methyltransferase | SAMN04488505_1068 | Not Available | Negative | 5429420 - 5430196 | 27539.7 |
| sulfite reductase (ferredoxin) | SAMN04488505_1069 | Not Available | Negative | 5430259 - 5432379 | 78617.7 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN04488505_10610 | Not Available | Negative | 5432673 - 5433527 | 31605.7 |
| sugar-phosphatase | SAMN04488505_10611 | Not Available | Positive | 5433845 - 5434501 | 24233.1 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04488505_10612 | Not Available | Negative | 5434688 - 5437396 | 100640.0 |
| small subunit ribosomal protein s1 | SAMN04488505_10613 | Not Available | Negative | 5437651 - 5439549 | 71023.3 |
| membrane associated serine protease, rhomboid family | SAMN04488505_10614 | Not Available | Positive | 5439692 - 5440591 | 33552.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04488505_10615 | Not Available | Positive | 5440892 - 5442124 | 45915.9 |
| two component transcriptional regulator, lyttr family | SAMN04488505_10616 | Not Available | Negative | 5442367 - 5443131 | 29305.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
