Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_105375 | Not Available | Positive | 5405811 - 5405927 | 4733.98 |
| transporter, sss family | SAMN04488505_105376 | Not Available | Positive | 5405924 - 5407627 | 63253.9 |
| hypothetical protein | SAMN04488505_105377 | Not Available | Negative | 5407749 - 5407988 | 8547.39 |
| hypothetical protein | SAMN04488505_105378 | Not Available | Negative | 5408002 - 5408292 | 10975.6 |
| hypothetical protein | SAMN04488505_105379 | Not Available | Negative | 5408305 - 5410494 | 80026.5 |
| protein of unknown function | SAMN04488505_105380 | Not Available | Negative | 5410754 - 5411602 | 31059.5 |
| two component transcriptional regulator, luxr family | SAMN04488505_105381 | Not Available | Negative | 5411783 - 5412457 | 25718.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_105382 | Not Available | Negative | 5412559 - 5413362 | 29761.3 |
| hypothetical protein | SAMN04488505_105383 | Not Available | Negative | 5413359 - 5413985 | 24076.3 |
| hypothetical protein | SAMN04488505_105384 | Not Available | Negative | 5414040 - 5414444 | 14693.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
