Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch synthase | SAMN04488505_105365 | Not Available | Positive | 5395717 - 5396535 | 31028.7 |
| protein of unknown function | SAMN04488505_105366 | Not Available | Positive | 5396551 - 5398023 | 54564.9 |
| methionine adenosyltransferase | SAMN04488505_105367 | Not Available | Positive | 5398043 - 5399296 | 46308.2 |
| peroxiredoxin q/bcp | SAMN04488505_105368 | Not Available | Negative | 5399435 - 5399965 | 19536.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_105369 | Not Available | Negative | 5400025 - 5400669 | 24279.5 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488505_105370 | Not Available | Positive | 5400791 - 5401363 | 22036.8 |
| aspartate carbamoyltransferase | SAMN04488505_105371 | Not Available | Positive | 5401416 - 5402351 | 34218.7 |
| hypothetical protein | SAMN04488505_105372 | Not Available | Positive | 5402476 - 5402805 | 12900.2 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04488505_105373 | Not Available | Positive | 5402915 - 5405395 | 91218.9 |
| hypothetical protein | SAMN04488505_105374 | Not Available | Positive | 5405397 - 5405561 | 5776.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
