Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-synthase | SAMN04488505_105344 | Not Available | Negative | 5371565 - 5372923 | 49855.0 |
| dethiobiotin synthetase | SAMN04488505_105345 | Not Available | Positive | 5373024 - 5373647 | 22476.2 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN04488505_105346 | Not Available | Positive | 5373672 - 5374256 | 22347.2 |
| lipid-a-disaccharide kinase | SAMN04488505_105347 | Not Available | Positive | 5374253 - 5375332 | 40951.8 |
| ribonuclease r | SAMN04488505_105348 | Not Available | Positive | 5375344 - 5377518 | 82277.1 |
| geranylgeranyl diphosphate synthase, type ii | SAMN04488505_105349 | Not Available | Positive | 5377564 - 5378535 | 36522.9 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488505_105350 | Not Available | Positive | 5378665 - 5380296 | 59869.2 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN04488505_105351 | Not Available | Positive | 5380621 - 5381058 | 16106.3 |
| smr domain-containing protein | SAMN04488505_105352 | Not Available | Positive | 5381234 - 5382259 | 40222.5 |
| hypothetical protein | SAMN04488505_105354 | Not Available | Positive | 5382710 - 5383123 | 15429.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
