Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_105334 | Not Available | Negative | 5349692 - 5354518 | 174787.0 |
| hypothetical protein | SAMN04488505_105335 | Not Available | Negative | 5354575 - 5356659 | 77693.9 |
| hypothetical protein | SAMN04488505_105336 | Not Available | Negative | 5356669 - 5361333 | 169860.0 |
| tfp pilus assembly protein pilf | SAMN04488505_105337 | Not Available | Negative | 5361748 - 5364732 | 112084.0 |
| hypothetical protein | SAMN04488505_105338 | Not Available | Negative | 5365331 - 5366464 | 43870.0 |
| ssra-binding protein | SAMN04488505_105339 | Not Available | Negative | 5366499 - 5366936 | 16963.8 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04488505_105340 | Not Available | Negative | 5367027 - 5367875 | 31644.6 |
| fructose-bisphosphate aldolase | SAMN04488505_105341 | Not Available | Negative | 5368211 - 5369278 | 39206.4 |
| rieske | SAMN04488505_105342 | Not Available | Negative | 5369955 - 5370389 | 14494.2 |
| abc-type fe3+-hydroxamate transport system, substrate-binding protein | SAMN04488505_105343 | Not Available | Negative | 5370468 - 5371310 | 31818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
