Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_105324 | Not Available | Negative | 5338079 - 5338249 | 6248.95 |
| dihydrofolate reductase | SAMN04488505_105325 | Not Available | Positive | 5338301 - 5338873 | 21286.7 |
| dinb superfamily protein | SAMN04488505_105326 | Not Available | Negative | 5338884 - 5339354 | 18332.3 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04488505_105327 | Not Available | Positive | 5339491 - 5341128 | 59570.1 |
| rnase hi | SAMN04488505_105328 | Not Available | Positive | 5341313 - 5341771 | 17377.8 |
| hypothetical protein | SAMN04488505_105329 | Not Available | Negative | 5341878 - 5342384 | 18876.4 |
| hypothetical protein | SAMN04488505_105330 | Not Available | Negative | 5342441 - 5344165 | 63935.0 |
| pkd repeat-containing protein | SAMN04488505_105331 | Not Available | Negative | 5344158 - 5345507 | 49004.5 |
| hypothetical protein | SAMN04488505_105332 | Not Available | Negative | 5345540 - 5346457 | 34288.6 |
| fibronectin type iii domain-containing protein | SAMN04488505_105333 | Not Available | Negative | 5346468 - 5349674 | 118268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
