Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m1 | SAMN04488505_105314 | Not Available | Positive | 5307419 - 5308846 | 53909.3 |
| rhs repeat-associated core domain-containing protein | SAMN04488505_105315 | Not Available | Positive | 5309028 - 5316596 | 279806.0 |
| peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing protein | SAMN04488505_105316 | Not Available | Positive | 5316642 - 5325434 | 328841.0 |
| nucleotidyltransferase domain-containing protein | SAMN04488505_105317 | Not Available | Positive | 5325438 - 5325755 | 12209.8 |
| hypothetical protein | SAMN04488505_105318 | Not Available | Positive | 5325800 - 5325931 | 5022.19 |
| hypothetical protein | SAMN04488505_105319 | Not Available | Negative | 5326009 - 5326335 | 11948.1 |
| hypothetical protein | SAMN04488505_105320 | Not Available | Positive | 5326672 - 5332260 | 201199.0 |
| hypothetical protein | SAMN04488505_105321 | Not Available | Positive | 5332309 - 5336682 | 161960.0 |
| rho-binding antiterminator | SAMN04488505_105322 | Not Available | Negative | 5336766 - 5337020 | 9910.84 |
| transcriptional regulator, marr family with acetyltransferase activity | SAMN04488505_105323 | Not Available | Positive | 5337223 - 5338161 | 36036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
