Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMN04488505_105294 | Not Available | Positive | 5279225 - 5279668 | 16327.4 |
| inward rectifier potassium channel | SAMN04488505_105295 | Not Available | Positive | 5279698 - 5280681 | 37365.1 |
| tellurite resistance protein teha | SAMN04488505_105296 | Not Available | Positive | 5280702 - 5281757 | 39794.1 |
| hypothetical protein | SAMN04488505_105297 | Not Available | Positive | 5281797 - 5282861 | 40103.8 |
| assimilatory nitrate reductase catalytic subunit | SAMN04488505_105298 | Not Available | Positive | 5282898 - 5285111 | 81984.6 |
| fe-s-cluster-containing dehydrogenase component | SAMN04488505_105299 | Not Available | Positive | 5285132 - 5285701 | 21063.7 |
| rieske fe-s protein | SAMN04488505_105300 | Not Available | Positive | 5285712 - 5286242 | 19366.2 |
| hypothetical protein | SAMN04488505_105301 | Not Available | Positive | 5286239 - 5286493 | 9619.09 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04488505_105302 | Not Available | Negative | 5286498 - 5288369 | 69984.3 |
| starch-binding associating with outer membrane | SAMN04488505_105303 | Not Available | Negative | 5288422 - 5290152 | 64228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
