Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_105284 | Not Available | Positive | 5268256 - 5268564 | 11785.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_105285 | Not Available | Positive | 5268850 - 5270916 | 77262.8 |
| pepsy-associated tm region | SAMN04488505_105286 | Not Available | Positive | 5270923 - 5272476 | 58246.1 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04488505_105287 | Not Available | Negative | 5273209 - 5273838 | 23671.2 |
| hypothetical protein | SAMN04488505_105288 | Not Available | Negative | 5274218 - 5275924 | 62490.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_105289 | Not Available | Positive | 5276079 - 5276660 | 22804.1 |
| hypothetical protein | SAMN04488505_105290 | Not Available | Positive | 5276668 - 5276943 | 10912.6 |
| hypothetical protein | SAMN04488505_105291 | Not Available | Positive | 5277029 - 5277361 | 11414.9 |
| hypothetical protein | SAMN04488505_105292 | Not Available | Positive | 5277650 - 5278480 | 31707.9 |
| hypothetical protein | SAMN04488505_105293 | Not Available | Positive | 5278467 - 5279225 | 29345.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
