Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caax protease self-immunity | SAMN04488505_105264 | Not Available | Positive | 5244593 - 5245417 | 30769.8 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04488505_105265 | Not Available | Negative | 5245343 - 5247031 | 65628.8 |
| hypothetical protein | SAMN04488505_105266 | Not Available | Positive | 5247433 - 5247651 | 8218.13 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_105267 | Not Available | Positive | 5247737 - 5250196 | 84886.6 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_105268 | Not Available | Positive | 5250313 - 5252277 | 67450.6 |
| carbohydrate binding module (family 6) | SAMN04488505_105269 | Not Available | Positive | 5252471 - 5252866 | 14371.3 |
| two component transcriptional regulator, lyttr family | SAMN04488505_105270 | Not Available | Negative | 5253102 - 5253800 | 26755.8 |
| histidine kinase | SAMN04488505_105271 | Not Available | Negative | 5253890 - 5255029 | 42877.1 |
| hypothetical protein | SAMN04488505_105272 | Not Available | Negative | 5255117 - 5256466 | 49674.1 |
| hypothetical protein | SAMN04488505_105273 | Not Available | Negative | 5256498 - 5256890 | 14713.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
