Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_105254 | Not Available | Positive | 5228087 - 5228743 | 24845.1 |
| transporter, sss family | SAMN04488505_105255 | Not Available | Negative | 5228750 - 5230402 | 59329.1 |
| hypothetical protein | SAMN04488505_105256 | Not Available | Negative | 5230420 - 5232975 | 95142.5 |
| fad dependent oxidoreductase | SAMN04488505_105257 | Not Available | Negative | 5232997 - 5235276 | 83652.6 |
| beta-glucuronidase | SAMN04488505_105258 | Not Available | Negative | 5235279 - 5237264 | 73934.0 |
| protein of unknown function | SAMN04488505_105259 | Not Available | Negative | 5237261 - 5238064 | 29311.1 |
| starch-binding associating with outer membrane | SAMN04488505_105260 | Not Available | Negative | 5238070 - 5239569 | 56078.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_105261 | Not Available | Negative | 5239582 - 5242626 | 109143.0 |
| transcriptional regulator, laci family | SAMN04488505_105262 | Not Available | Positive | 5242853 - 5244010 | 42818.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488505_105263 | Not Available | Positive | 5244116 - 5244565 | 16974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
