Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase superfamily protein | SAMN04488505_105244 | Not Available | Positive | 5218380 - 5219234 | 33045.5 |
| phosphonoacetate hydrolase | SAMN04488505_105245 | Not Available | Positive | 5219440 - 5220024 | 21918.2 |
| hypothetical protein | SAMN04488505_105246 | Not Available | Negative | 5220254 - 5220880 | 22907.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_105247 | Not Available | Negative | 5220820 - 5221359 | 20172.2 |
| hypothetical protein | SAMN04488505_105248 | Not Available | Negative | 5221367 - 5222191 | 30640.7 |
| lipocalin-like domain-containing protein | SAMN04488505_105249 | Not Available | Positive | 5222434 - 5222853 | 15016.5 |
| arac-type dna-binding protein | SAMN04488505_105250 | Not Available | Negative | 5223075 - 5223929 | 32659.9 |
| solute:na+ symporter, sss family | SAMN04488505_105251 | Not Available | Positive | 5224080 - 5225609 | 55392.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488505_105252 | Not Available | Positive | 5225628 - 5226566 | 35147.5 |
| tigr03118 family protein | SAMN04488505_105253 | Not Available | Positive | 5226902 - 5227975 | 38424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
