Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulator | SAMN04488505_105214 | Not Available | Positive | 5182582 - 5182986 | 15238.5 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN04488505_105215 | Not Available | Positive | 5183005 - 5185290 | 85453.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_105216 | Not Available | Positive | 5185353 - 5187785 | 90423.9 |
| transcriptional regulator, arac family | SAMN04488505_105217 | Not Available | Positive | 5187877 - 5188734 | 32453.1 |
| transcriptional regulator, arac family | SAMN04488505_105218 | Not Available | Positive | 5188813 - 5189628 | 30966.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_105219 | Not Available | Negative | 5189698 - 5190285 | 22651.5 |
| sodium/proton antiporter, cpa1 family | SAMN04488505_105220 | Not Available | Positive | 5190380 - 5191657 | 46475.6 |
| hypothetical protein | SAMN04488505_105221 | Not Available | Positive | 5191740 - 5191952 | 7432.51 |
| lipopolysaccharide biosynthesis protein | SAMN04488505_105222 | Not Available | Negative | 5192207 - 5193292 | 42823.7 |
| glycosyl transferase family 2 | SAMN04488505_105223 | Not Available | Negative | 5193335 - 5194279 | 36640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
