Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_105204 | Not Available | Negative | 5169496 - 5170548 | 38080.8 |
| hypothetical protein | SAMN04488505_105205 | Not Available | Negative | 5170559 - 5171659 | 39760.7 |
| starch-binding associating with outer membrane | SAMN04488505_105206 | Not Available | Negative | 5171689 - 5173239 | 57050.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_105207 | Not Available | Negative | 5173252 - 5176680 | 125312.0 |
| fecr family protein | SAMN04488505_105208 | Not Available | Negative | 5176825 - 5177994 | 42852.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_105209 | Not Available | Negative | 5178078 - 5178659 | 22667.7 |
| hypothetical protein | SAMN04488505_105210 | Not Available | Positive | 5178905 - 5179333 | 16676.7 |
| undecaprenyl-diphosphatase | SAMN04488505_105211 | Not Available | Negative | 5179338 - 5179934 | 21557.2 |
| hypothetical protein | SAMN04488505_105212 | Not Available | Positive | 5180152 - 5180847 | 26308.5 |
| hypothetical protein | SAMN04488505_105213 | Not Available | Negative | 5180907 - 5182385 | 52684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
