Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04488505_105184 | Not Available | Positive | 5145035 - 5145418 | 14300.7 |
| histidine kinase | SAMN04488505_105185 | Not Available | Positive | 5145592 - 5146632 | 39423.7 |
| two component transcriptional regulator, lyttr family | SAMN04488505_105186 | Not Available | Positive | 5146629 - 5147324 | 26311.3 |
| hypothetical protein | SAMN04488505_105187 | Not Available | Positive | 5147576 - 5147923 | 12532.9 |
| atp-binding cassette, subfamily b | SAMN04488505_105188 | Not Available | Negative | 5148300 - 5150471 | 82012.6 |
| hypothetical protein | SAMN04488505_105189 | Not Available | Negative | 5150468 - 5151724 | 48308.1 |
| hypothetical protein | SAMN04488505_105190 | Not Available | Negative | 5151731 - 5153008 | 48961.8 |
| hypothetical protein | SAMN04488505_105191 | Not Available | Negative | 5153085 - 5153237 | 5436.38 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_105192 | Not Available | Negative | 5153370 - 5155721 | 89153.9 |
| iron complex outermembrane recepter protein | SAMN04488505_105193 | Not Available | Negative | 5156061 - 5158427 | 87665.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
