Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding module (family 6) | SAMN04488505_105174 | Not Available | Positive | 5136986 - 5138506 | 55885.3 |
| lysophospholipase l1 | SAMN04488505_105175 | Not Available | Positive | 5138534 - 5139637 | 39690.8 |
| protein of unknown function | SAMN04488505_105176 | Not Available | Positive | 5139777 - 5140250 | 18355.6 |
| uncharacterized conserved protein yeao, duf488 family | SAMN04488505_105177 | Not Available | Positive | 5140356 - 5140706 | 13939.6 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN04488505_105178 | Not Available | Positive | 5140936 - 5142108 | 43762.6 |
| hypothetical protein | SAMN04488505_105179 | Not Available | Negative | 5142172 - 5142336 | 6230.84 |
| hypothetical protein | SAMN04488505_105180 | Not Available | Positive | 5142377 - 5142718 | 12263.9 |
| hypothetical protein | SAMN04488505_105181 | Not Available | Negative | 5142731 - 5143360 | 23387.0 |
| uncharacterized conserved protein (cog2071) | SAMN04488505_105182 | Not Available | Negative | 5143365 - 5144087 | 27082.3 |
| fatty acid hydroxylase superfamily protein | SAMN04488505_105183 | Not Available | Negative | 5144095 - 5144796 | 27255.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
