Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_105154 | Not Available | Negative | 5107508 - 5110666 | 116881.0 |
| peptidase family m1 | SAMN04488505_105155 | Not Available | Negative | 5111095 - 5112792 | 64722.8 |
| hypothetical protein | SAMN04488505_105156 | Not Available | Positive | 5112968 - 5113198 | 8537.89 |
| arac-type dna-binding protein | SAMN04488505_105157 | Not Available | Positive | 5113683 - 5114579 | 34988.2 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488505_105158 | Not Available | Negative | 5114819 - 5117614 | 104127.0 |
| starch-binding associating with outer membrane | SAMN04488505_105159 | Not Available | Negative | 5117701 - 5119227 | 56903.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_105160 | Not Available | Negative | 5119251 - 5122316 | 109751.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_105161 | Not Available | Negative | 5122678 - 5123418 | 25899.4 |
| transcriptional regulator, arac family | SAMN04488505_105162 | Not Available | Negative | 5123519 - 5124394 | 33767.3 |
| hypothetical protein | SAMN04488505_105163 | Not Available | Positive | 5124759 - 5125748 | 36890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
