Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_105144 | Not Available | Positive | 5097018 - 5097419 | 15113.7 |
| acyl-coa hydrolase | SAMN04488505_105145 | Not Available | Positive | 5097528 - 5098820 | 46787.2 |
| ycei-like domain-containing protein | SAMN04488505_105146 | Not Available | Negative | 5098875 - 5099537 | 24680.0 |
| hypothetical protein | SAMN04488505_105147 | Not Available | Negative | 5099569 - 5100972 | 51544.1 |
| polyisoprenoid-binding protein ycei | SAMN04488505_105148 | Not Available | Negative | 5101006 - 5101590 | 20653.1 |
| heparinase ii/iii-like protein | SAMN04488505_105149 | Not Available | Negative | 5102074 - 5104026 | 73205.9 |
| hypothetical protein | SAMN04488505_105150 | Not Available | Negative | 5104046 - 5104159 | 4255.19 |
| protein of unknown function | SAMN04488505_105151 | Not Available | Negative | 5104188 - 5105177 | 36143.2 |
| hypothetical protein | SAMN04488505_105152 | Not Available | Negative | 5105200 - 5105607 | 15097.1 |
| starch-binding associating with outer membrane | SAMN04488505_105153 | Not Available | Negative | 5105650 - 5107497 | 68804.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
