Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488505_105134 | Not Available | Positive | 5085652 - 5087340 | 62912.2 |
| ahpc/tsa family protein | SAMN04488505_105135 | Not Available | Positive | 5087412 - 5087984 | 21168.6 |
| copper type ii ascorbate-dependent monooxygenase, c-terminal domain | SAMN04488505_105136 | Not Available | Positive | 5087990 - 5089288 | 49172.9 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488505_105137 | Not Available | Positive | 5089408 - 5090655 | 45012.7 |
| nlpc/p60 family protein | SAMN04488505_105138 | Not Available | Negative | 5090658 - 5091233 | 20670.8 |
| hypothetical protein | SAMN04488505_105139 | Not Available | Negative | 5091349 - 5091873 | 19619.4 |
| glyoxalase-like domain-containing protein | SAMN04488505_105140 | Not Available | Negative | 5092081 - 5092479 | 14324.2 |
| pas domain s-box-containing protein | SAMN04488505_105141 | Not Available | Positive | 5092781 - 5095252 | 92847.3 |
| hypothetical protein | SAMN04488505_105142 | Not Available | Negative | 5095270 - 5096094 | 30691.4 |
| dienelactone hydrolase | SAMN04488505_105143 | Not Available | Positive | 5096317 - 5096979 | 24374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
