Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, cpa2 family | SAMN04488505_105124 | Not Available | Negative | 5073036 - 5074220 | 43244.9 |
| chaperonin groes | SAMN04488505_105125 | Not Available | Positive | 5074510 - 5074791 | 10010.2 |
| chaperonin groel | SAMN04488505_105126 | Not Available | Positive | 5074849 - 5076480 | 58277.1 |
| hypothetical protein | SAMN04488505_105127 | Not Available | Negative | 5076583 - 5076732 | 5918.21 |
| transketolase | SAMN04488505_105128 | Not Available | Positive | 5076895 - 5078745 | 66987.6 |
| beta-lactamase | SAMN04488505_105129 | Not Available | Negative | 5078768 - 5079742 | 36551.8 |
| beta-lactamase | SAMN04488505_105130 | Not Available | Negative | 5079702 - 5080412 | 26527.6 |
| transcriptional regulator, hxlr family | SAMN04488505_105131 | Not Available | Negative | 5080487 - 5080849 | 13512.4 |
| doxx-like family protein | SAMN04488505_105132 | Not Available | Positive | 5080987 - 5081352 | 13502.2 |
| iron complex outermembrane recepter protein | SAMN04488505_105133 | Not Available | Positive | 5082231 - 5085596 | 122328.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
