Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein fis | SAMN04488505_105104 | Not Available | Positive | 5052328 - 5054958 | 99193.1 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_105105 | Not Available | Positive | 5055137 - 5055895 | 26915.2 |
| hypothetical protein | SAMN04488505_105106 | Not Available | Positive | 5055937 - 5056194 | 9319.57 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMN04488505_105107 | Not Available | Negative | 5056277 - 5057077 | 30414.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_105108 | Not Available | Positive | 5057260 - 5059179 | 69757.0 |
| adenylylsulfate kinase | SAMN04488505_105109 | Not Available | Negative | 5059220 - 5059750 | 19638.7 |
| hypothetical protein | SAMN04488505_105110 | Not Available | Negative | 5059755 - 5060711 | 37087.2 |
| aspartyl/asparaginyl beta-hydroxylase | SAMN04488505_105111 | Not Available | Negative | 5060711 - 5061391 | 25312.5 |
| hypothetical protein | SAMN04488505_105112 | Not Available | Negative | 5061568 - 5062203 | 24891.1 |
| hypothetical protein | SAMN04488505_105113 | Not Available | Negative | 5062277 - 5062828 | 20812.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
