Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10594 | Not Available | Negative | 5037602 - 5038093 | 17848.9 |
| hypothetical protein | SAMN04488505_10595 | Not Available | Positive | 5038238 - 5038603 | 14008.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10596 | Not Available | Positive | 5038829 - 5042020 | 110458.0 |
| transcriptional regulator, arac family | SAMN04488505_10597 | Not Available | Negative | 5042085 - 5042873 | 30480.6 |
| lysophospholipase l1 | SAMN04488505_10598 | Not Available | Positive | 5043001 - 5043957 | 35867.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_10599 | Not Available | Positive | 5044138 - 5044746 | 23535.5 |
| hypothetical protein | SAMN04488505_105100 | Not Available | Positive | 5044849 - 5045508 | 23223.1 |
| exodeoxyribonuclease iii | SAMN04488505_105101 | Not Available | Positive | 5045653 - 5046432 | 29593.7 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_105102 | Not Available | Positive | 5046657 - 5051534 | 175351.0 |
| hypothetical protein | SAMN04488505_105103 | Not Available | Negative | 5051548 - 5052099 | 21960.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
