Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04488505_10584 | Not Available | Negative | 5022833 - 5023918 | 39852.1 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN04488505_10585 | Not Available | Negative | 5023942 - 5024964 | 37571.5 |
| hypothetical protein | SAMN04488505_10586 | Not Available | Positive | 5025252 - 5025401 | 5807.13 |
| alpha/beta hydrolase family | SAMN04488505_10587 | Not Available | Positive | 5025466 - 5025825 | 13499.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_10588 | Not Available | Negative | 5025881 - 5026666 | 29863.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10589 | Not Available | Negative | 5026680 - 5028527 | 67092.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10590 | Not Available | Negative | 5028697 - 5030703 | 74281.6 |
| duplicated orphan permease | SAMN04488505_10591 | Not Available | Negative | 5030941 - 5033340 | 90072.5 |
| transcriptional regulator, arac family | SAMN04488505_10592 | Not Available | Positive | 5033514 - 5034656 | 43993.6 |
| aminopeptidase n | SAMN04488505_10593 | Not Available | Positive | 5034730 - 5037594 | 109863.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
