Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10564 | Not Available | Negative | 5004356 - 5005168 | 30234.0 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN04488505_10565 | Not Available | Negative | 5005232 - 5006815 | 60139.4 |
| putative abc transport system permease protein | SAMN04488505_10566 | Not Available | Positive | 5006879 - 5008267 | 50626.2 |
| hypothetical protein | SAMN04488505_10567 | Not Available | Positive | 5008327 - 5008644 | 11735.5 |
| o-sialoglycoprotein endopeptidase | SAMN04488505_10568 | Not Available | Positive | 5008673 - 5009677 | 35701.1 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04488505_10569 | Not Available | Positive | 5009745 - 5010461 | 26180.4 |
| hypothetical protein | SAMN04488505_10570 | Not Available | Negative | 5010465 - 5010965 | 17533.8 |
| alanine dehydrogenase | SAMN04488505_10571 | Not Available | Negative | 5011027 - 5012259 | 46517.6 |
| Trna-leu | Not Available | Not Available | Positive | 5012349 - 5012432 | Not Available |
| papain family cysteine protease | SAMN04488505_10573 | Not Available | Positive | 5012694 - 5013752 | 39549.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
