Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10554 | Not Available | Negative | 4994877 - 4995044 | 5940.42 |
| hypothetical protein | SAMN04488505_10555 | Not Available | Negative | 4995105 - 4995671 | 22117.3 |
| phosphinothricin acetyltransferase | SAMN04488505_10556 | Not Available | Negative | 4995737 - 4996237 | 18519.5 |
| predicted purr-regulated permease perm | SAMN04488505_10557 | Not Available | Negative | 4996349 - 4997440 | 40533.9 |
| glycosyl hydrolase family 20, catalytic domain | SAMN04488505_10558 | Not Available | Positive | 4997555 - 4998655 | 41882.3 |
| arac-type dna-binding protein | SAMN04488505_10559 | Not Available | Negative | 4998712 - 4999638 | 35458.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_10560 | Not Available | Positive | 4999877 - 5000737 | 32359.6 |
| hypothetical protein | SAMN04488505_10561 | Not Available | Positive | 5001138 - 5001449 | 11893.5 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04488505_10562 | Not Available | Positive | 5001592 - 5003511 | 72252.9 |
| hypothetical protein | SAMN04488505_10563 | Not Available | Positive | 5003483 - 5003974 | 18943.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
