Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute:na+ symporter, sss family | SAMN04488505_10534 | Not Available | Positive | 4973337 - 4975034 | 62193.8 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_10535 | Not Available | Positive | 4975394 - 4975846 | 17431.2 |
| transporter, cpa2 family | SAMN04488505_10536 | Not Available | Positive | 4975947 - 4978184 | 81118.2 |
| hypothetical protein | SAMN04488505_10537 | Not Available | Negative | 4978497 - 4979312 | 30667.3 |
| hypothetical protein | SAMN04488505_10538 | Not Available | Positive | 4979513 - 4980157 | 24347.3 |
| hypothetical protein | SAMN04488505_10539 | Not Available | Negative | 4980378 - 4980590 | 7963.88 |
| hypothetical protein | SAMN04488505_10540 | Not Available | Negative | 4980657 - 4980821 | 6344.77 |
| hypothetical protein | SAMN04488505_10541 | Not Available | Negative | 4980861 - 4981121 | 9925.4 |
| mfs transporter, sugar porter (sp) family | SAMN04488505_10542 | Not Available | Positive | 4981727 - 4983151 | 51650.9 |
| tfp pilus assembly protein pilf | SAMN04488505_10543 | Not Available | Positive | 4983190 - 4986504 | 126640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
