Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7tmr-dism extracellular 2 | SAMN04488505_10524 | Not Available | Positive | 4958550 - 4960469 | 74986.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10525 | Not Available | Positive | 4960794 - 4963748 | 107713.0 |
| susd family protein | SAMN04488505_10526 | Not Available | Positive | 4963760 - 4965226 | 55014.5 |
| glucosylceramidase | SAMN04488505_10527 | Not Available | Positive | 4965314 - 4966753 | 52183.2 |
| galactose mutarotase | SAMN04488505_10528 | Not Available | Positive | 4966838 - 4967707 | 32701.8 |
| hypothetical protein | SAMN04488505_10529 | Not Available | Positive | 4967889 - 4968086 | 7054.2 |
| alpha-n-arabinofuranosidase | SAMN04488505_10530 | Not Available | Negative | 4968209 - 4969753 | 58040.9 |
| hypothetical protein | SAMN04488505_10531 | Not Available | Positive | 4970286 - 4970762 | 18026.6 |
| fecr family protein | SAMN04488505_10532 | Not Available | Positive | 4970955 - 4972109 | 43372.5 |
| calcineurin-like phosphoesterase | SAMN04488505_10533 | Not Available | Positive | 4972218 - 4973243 | 38554.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
