Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104521 | Not Available | Positive | 4920327 - 4920899 | 21603.0 |
| crispr-associated endonuclease/helicase cas3 | SAMN04488505_104522 | Not Available | Positive | 4920899 - 4923034 | 80873.0 |
| hypothetical protein | SAMN04488505_104523 | Not Available | Positive | 4923046 - 4924329 | 48510.9 |
| hypothetical protein | SAMN04488505_104524 | Not Available | Positive | 4924340 - 4925404 | 39962.6 |
| crispr-associated exonuclease, cas4 family | SAMN04488505_104525 | Not Available | Positive | 4925679 - 4926212 | 20905.7 |
| crispr-associated protein, cas1 family | SAMN04488505_104526 | Not Available | Positive | 4926209 - 4927213 | 39004.1 |
| crispr-associated protein, cas2 family | SAMN04488505_104527 | Not Available | Positive | 4927224 - 4927487 | 10494.0 |
| integrase core domain-containing protein | SAMN04488505_1051 | Not Available | Positive | 4927789 - 4928091 | 11426.3 |
| alpha-1,2-mannosidase, putative | SAMN04488505_1052 | Not Available | Positive | 4928366 - 4931575 | 117550.0 |
| putative acetyltransferase | SAMN04488505_1053 | Not Available | Positive | 4931615 - 4932100 | 17973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
