Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_104511 | Not Available | Negative | 4905580 - 4908726 | 114769.0 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN04488505_104512 | Not Available | Negative | 4908979 - 4911384 | 90086.3 |
| hypothetical protein | SAMN04488505_104513 | Not Available | Positive | 4911452 - 4911622 | 6413.86 |
| signal transduction histidine kinase | SAMN04488505_104514 | Not Available | Positive | 4911631 - 4915932 | 162503.0 |
| Trna-gly | Not Available | Not Available | Positive | 4915987 - 4916059 | Not Available |
| hypothetical protein | SAMN04488505_104516 | Not Available | Negative | 4916156 - 4916356 | 7779.3 |
| hypothetical protein | SAMN04488505_104517 | Not Available | Negative | 4916627 - 4917679 | 40634.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_104518 | Not Available | Positive | 4917875 - 4919059 | 44738.6 |
| Trna-leu | Not Available | Not Available | Positive | 4919199 - 4919285 | Not Available |
| crispr-associated protein, cas6 family | SAMN04488505_104520 | Not Available | Positive | 4919663 - 4920319 | 24472.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
