Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase 2 | SAMN04488505_104501 | Not Available | Negative | 4881333 - 4883852 | 92789.6 |
| signal transduction histidine kinase | SAMN04488505_104502 | Not Available | Positive | 4884106 - 4888248 | 156809.0 |
| alpha-d-xyloside xylohydrolase | SAMN04488505_104503 | Not Available | Positive | 4888707 - 4891559 | 108058.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_104504 | Not Available | Positive | 4891749 - 4894862 | 114085.0 |
| susd family protein | SAMN04488505_104505 | Not Available | Positive | 4894889 - 4896448 | 58778.2 |
| hypothetical protein | SAMN04488505_104506 | Not Available | Positive | 4896472 - 4897239 | 28307.6 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_104507 | Not Available | Negative | 4897399 - 4899777 | 88243.4 |
| hypothetical protein | SAMN04488505_104508 | Not Available | Negative | 4899896 - 4902652 | 102690.0 |
| glycosyl hydrolases family 43 | SAMN04488505_104509 | Not Available | Negative | 4902806 - 4903873 | 40195.5 |
| susd family protein | SAMN04488505_104510 | Not Available | Negative | 4904088 - 4905575 | 55102.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
