Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN04488505_104491 | Not Available | Negative | 4864370 - 4865374 | 37185.9 |
| threonine/homoserine efflux transporter rhta | SAMN04488505_104492 | Not Available | Positive | 4865728 - 4866570 | 30050.3 |
| aminopeptidase n | SAMN04488505_104493 | Not Available | Negative | 4866627 - 4869035 | 91436.8 |
| transcriptional regulator, arac family | SAMN04488505_104494 | Not Available | Positive | 4869194 - 4870003 | 30476.8 |
| d-glucuronate isomerase | SAMN04488505_104495 | Not Available | Negative | 4870047 - 4871477 | 55050.9 |
| tagaturonate reductase | SAMN04488505_104496 | Not Available | Negative | 4871489 - 4873021 | 56229.0 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488505_104497 | Not Available | Negative | 4873127 - 4875019 | 71358.3 |
| dna sulfur modification protein dnde | SAMN04488505_104498 | Not Available | Negative | 4875032 - 4877368 | 85832.0 |
| transcriptional regulator, laci family | SAMN04488505_104499 | Not Available | Positive | 4877819 - 4878832 | 37670.7 |
| hypothetical protein | SAMN04488505_104500 | Not Available | Negative | 4879095 - 4881305 | 84189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
