Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104461 | Not Available | Negative | 4823919 - 4824647 | 28210.2 |
| smi1 / knr4 family (sukh-1) | SAMN04488505_104462 | Not Available | Negative | 4824647 - 4826005 | 51860.8 |
| transcriptional regulator, arac family | SAMN04488505_104463 | Not Available | Negative | 4826044 - 4826964 | 34070.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_104464 | Not Available | Positive | 4827058 - 4827792 | 25603.8 |
| atpase family associated with various cellular activities (aaa) | SAMN04488505_104465 | Not Available | Negative | 4827815 - 4829155 | 50615.7 |
| hypothetical protein | SAMN04488505_104466 | Not Available | Negative | 4829152 - 4832997 | 145513.0 |
| hypothetical protein | SAMN04488505_104467 | Not Available | Negative | 4832994 - 4835639 | 102670.0 |
| hypothetical protein | SAMN04488505_104468 | Not Available | Negative | 4835673 - 4836458 | 30390.1 |
| hypothetical protein | SAMN04488505_104469 | Not Available | Negative | 4836471 - 4840301 | 146921.0 |
| hypothetical protein | SAMN04488505_104470 | Not Available | Negative | 4840298 - 4840720 | 16007.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
