Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104451 | Not Available | Negative | 4814702 - 4815052 | 12708.5 |
| protein of unknown function | SAMN04488505_104452 | Not Available | Positive | 4815274 - 4815855 | 21041.6 |
| hypothetical protein | SAMN04488505_104453 | Not Available | Negative | 4816240 - 4816560 | 13089.4 |
| hypothetical protein | SAMN04488505_104454 | Not Available | Negative | 4816588 - 4817001 | 15924.2 |
| hypothetical protein | SAMN04488505_104455 | Not Available | Negative | 4817016 - 4817462 | 16440.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_104456 | Not Available | Positive | 4817655 - 4818692 | 38715.1 |
| predicted transcriptional regulator | SAMN04488505_104457 | Not Available | Positive | 4818814 - 4819179 | 13762.9 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN04488505_104458 | Not Available | Positive | 4819181 - 4820272 | 40794.3 |
| ftsx-like permease family protein | SAMN04488505_104459 | Not Available | Positive | 4820302 - 4822773 | 89805.1 |
| hypothetical protein | SAMN04488505_104460 | Not Available | Negative | 4822923 - 4823882 | 35885.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
