Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04488505_104441 | Not Available | Negative | 4800675 - 4801583 | 34394.4 |
| susd family protein | SAMN04488505_104442 | Not Available | Negative | 4801612 - 4803063 | 55270.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_104443 | Not Available | Negative | 4803076 - 4806741 | 136212.0 |
| fecr family protein | SAMN04488505_104444 | Not Available | Negative | 4807250 - 4808269 | 38090.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_104445 | Not Available | Negative | 4808388 - 4808978 | 23103.9 |
| alpha/beta hydrolase family protein | SAMN04488505_104446 | Not Available | Positive | 4809260 - 4811704 | 89617.8 |
| hypothetical protein | SAMN04488505_104447 | Not Available | Negative | 4811917 - 4812591 | 24828.4 |
| hypothetical protein | SAMN04488505_104448 | Not Available | Negative | 4812877 - 4813269 | 13953.7 |
| hypothetical protein | SAMN04488505_104449 | Not Available | Negative | 4813738 - 4814013 | 10228.5 |
| hypothetical protein | SAMN04488505_104450 | Not Available | Negative | 4814207 - 4814518 | 11133.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
