Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide (tpr) repeat | SAMN04488505_104431 | Not Available | Negative | 4778757 - 4779863 | 40896.4 |
| hypothetical protein | SAMN04488505_104432 | Not Available | Positive | 4780195 - 4780518 | 11713.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_104433 | Not Available | Negative | 4780891 - 4781478 | 22782.5 |
| hypothetical protein | SAMN04488505_104434 | Not Available | Negative | 4781593 - 4782165 | 20178.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_104435 | Not Available | Negative | 4782216 - 4783235 | 37157.3 |
| outer membrane protein ompa | SAMN04488505_104436 | Not Available | Negative | 4783335 - 4785110 | 66098.6 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_104437 | Not Available | Negative | 4785133 - 4786227 | 40269.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_104438 | Not Available | Negative | 4786245 - 4790351 | 146387.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_104439 | Not Available | Negative | 4790368 - 4799283 | 317000.0 |
| protein of unknown function | SAMN04488505_104440 | Not Available | Negative | 4799358 - 4800653 | 48335.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
