Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104420 | Not Available | Positive | 4765424 - 4766446 | 36777.7 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04488505_104421 | Not Available | Positive | 4766650 - 4767231 | 22508.3 |
| protein of unknown function | SAMN04488505_104423 | Not Available | Positive | 4767747 - 4768850 | 39079.4 |
| outer membrane cobalamin receptor protein | SAMN04488505_104424 | Not Available | Positive | 4768853 - 4770865 | 76420.3 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN04488505_104425 | Not Available | Positive | 4770878 - 4771999 | 41907.9 |
| hypothetical protein | SAMN04488505_104426 | Not Available | Positive | 4772012 - 4772992 | 35798.2 |
| hypothetical protein | SAMN04488505_104427 | Not Available | Negative | 4773076 - 4775964 | 110025.0 |
| swim zinc finger | SAMN04488505_104428 | Not Available | Negative | 4775973 - 4777316 | 49980.4 |
| hypothetical protein | SAMN04488505_104429 | Not Available | Negative | 4777377 - 4778300 | 35263.1 |
| thioredoxin | SAMN04488505_104430 | Not Available | Negative | 4778375 - 4778692 | 11698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
