Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104410 | Not Available | Negative | 4751395 - 4753728 | 90181.3 |
| hypothetical protein | SAMN04488505_104411 | Not Available | Positive | 4753835 - 4753984 | 5932.3 |
| hypothetical protein | SAMN04488505_104412 | Not Available | Negative | 4754173 - 4754466 | 10780.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_104413 | Not Available | Negative | 4754628 - 4756751 | 78031.6 |
| hypothetical protein | SAMN04488505_104414 | Not Available | Negative | 4756949 - 4757515 | 20676.7 |
| hypothetical protein | SAMN04488505_104415 | Not Available | Negative | 4757646 - 4757999 | 14316.5 |
| protein of unknown function | SAMN04488505_104416 | Not Available | Negative | 4758111 - 4758602 | 18174.6 |
| cation diffusion facilitator family transporter | SAMN04488505_104417 | Not Available | Positive | 4758729 - 4759640 | 33594.0 |
| part of aaa domain-containing protein | SAMN04488505_104418 | Not Available | Positive | 4759706 - 4763959 | 160567.0 |
| dna recombination protein rmuc | SAMN04488505_104419 | Not Available | Positive | 4764027 - 4765364 | 50075.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
