Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104400 | Not Available | Negative | 4737149 - 4737856 | 25822.7 |
| two component transcriptional regulator, luxr family | SAMN04488505_104401 | Not Available | Negative | 4737934 - 4738560 | 22770.7 |
| histidine kinase | SAMN04488505_104402 | Not Available | Negative | 4738607 - 4740613 | 76004.8 |
| cellulase (glycosyl hydrolase family 5) | SAMN04488505_104403 | Not Available | Negative | 4740639 - 4741724 | 41422.9 |
| hypothetical protein | SAMN04488505_104404 | Not Available | Positive | 4741759 - 4742160 | 14663.5 |
| protein of unknown function | SAMN04488505_104405 | Not Available | Negative | 4742137 - 4742520 | 14529.8 |
| hypothetical protein | SAMN04488505_104406 | Not Available | Negative | 4742498 - 4743298 | 29731.6 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_104407 | Not Available | Negative | 4743323 - 4744522 | 43542.5 |
| hypothetical protein | SAMN04488505_104408 | Not Available | Negative | 4744646 - 4745905 | 48035.3 |
| signal transduction histidine kinase | SAMN04488505_104409 | Not Available | Negative | 4745929 - 4751208 | 193370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
