Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN04488505_104380 | Not Available | Positive | 4716449 - 4718545 | 79440.9 |
| two component transcriptional regulator, luxr family | SAMN04488505_104381 | Not Available | Positive | 4718526 - 4719167 | 23287.4 |
| arylsulfatase a | SAMN04488505_104382 | Not Available | Negative | 4719240 - 4720766 | 58687.9 |
| duf1680 family protein | SAMN04488505_104383 | Not Available | Negative | 4720782 - 4722794 | 76745.0 |
| penicillin amidase | SAMN04488505_104384 | Not Available | Negative | 4722800 - 4723021 | 8289.95 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_104385 | Not Available | Positive | 4723137 - 4723592 | 17640.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488505_104386 | Not Available | Positive | 4723589 - 4724434 | 31946.0 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488505_104387 | Not Available | Negative | 4724692 - 4727925 | 120805.0 |
| hypothetical protein | SAMN04488505_104388 | Not Available | Positive | 4728123 - 4728791 | 25077.0 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN04488505_104389 | Not Available | Negative | 4728809 - 4729264 | 16813.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
