Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104370 | Not Available | Negative | 4708799 - 4709500 | 25387.8 |
| two-component system, ompr family, phosphate regulon response regulator phob | SAMN04488505_104371 | Not Available | Negative | 4709562 - 4709936 | 13980.2 |
| hypothetical protein | SAMN04488505_104372 | Not Available | Negative | 4710119 - 4710505 | 14995.6 |
| secondary thiamine-phosphate synthase enzyme | SAMN04488505_104373 | Not Available | Positive | 4710623 - 4711045 | 15706.7 |
| predicted purr-regulated permease perm | SAMN04488505_104374 | Not Available | Negative | 4711047 - 4712141 | 39720.2 |
| hypothetical protein | SAMN04488505_104375 | Not Available | Negative | 4712288 - 4712416 | 4759.88 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04488505_104376 | Not Available | Positive | 4712522 - 4712782 | 9631.47 |
| two-component system, ntrc family, response regulator hydg | SAMN04488505_104377 | Not Available | Positive | 4712841 - 4714211 | 50495.7 |
| linoleoyl-coa desaturase | SAMN04488505_104378 | Not Available | Negative | 4714216 - 4715325 | 42957.8 |
| wd40-like beta propeller repeat | SAMN04488505_104379 | Not Available | Negative | 4715407 - 4716387 | 36296.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
