Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04488505_104360 | Not Available | Negative | 4692929 - 4693423 | 18135.7 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04488505_104361 | Not Available | Negative | 4693586 - 4696081 | 91662.9 |
| arylsulfatase | SAMN04488505_104362 | Not Available | Negative | 4696127 - 4697851 | 64123.9 |
| starch-binding associating with outer membrane | SAMN04488505_104363 | Not Available | Negative | 4697918 - 4699513 | 58279.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_104364 | Not Available | Negative | 4699521 - 4702880 | 123658.0 |
| fecr family protein | SAMN04488505_104365 | Not Available | Negative | 4703061 - 4704248 | 43161.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_104366 | Not Available | Negative | 4704316 - 4704900 | 22712.8 |
| duplicated orphan permease | SAMN04488505_104367 | Not Available | Negative | 4704964 - 4707345 | 87208.7 |
| arac-type dna-binding protein | SAMN04488505_104368 | Not Available | Negative | 4707464 - 4708297 | 32638.5 |
| thiosulfate dehydrogenase | SAMN04488505_104369 | Not Available | Positive | 4708388 - 4708783 | 14408.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
