Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase, fkbm family | SAMN04488505_104350 | Not Available | Negative | 4681408 - 4682145 | 27557.5 |
| mannosyltransferase | SAMN04488505_104351 | Not Available | Negative | 4682142 - 4683242 | 42101.1 |
| hypothetical protein | SAMN04488505_104352 | Not Available | Negative | 4683284 - 4684729 | 54924.0 |
| hypothetical protein | SAMN04488505_104353 | Not Available | Negative | 4684732 - 4685637 | 34997.1 |
| predicted sam-depedendent methyltransferase | SAMN04488505_104354 | Not Available | Negative | 4685637 - 4686287 | 24729.8 |
| methyltransferase, fkbm family | SAMN04488505_104355 | Not Available | Negative | 4686287 - 4686979 | 26930.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488505_104356 | Not Available | Negative | 4686972 - 4688291 | 48351.9 |
| capsular exopolysaccharide family | SAMN04488505_104357 | Not Available | Negative | 4688317 - 4690677 | 89098.4 |
| protein involved in gliding motility epsa | SAMN04488505_104358 | Not Available | Negative | 4690687 - 4691433 | 26743.6 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488505_104359 | Not Available | Negative | 4691484 - 4692725 | 47738.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
