Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04488505_104310 | Not Available | Negative | 4631630 - 4632295 | 24878.1 |
| tpr repeat-containing protein | SAMN04488505_104311 | Not Available | Negative | 4632292 - 4633941 | 63371.4 |
| hypothetical protein | SAMN04488505_104312 | Not Available | Negative | 4634077 - 4634229 | 5346.21 |
| hypothetical protein | SAMN04488505_104313 | Not Available | Positive | 4634591 - 4635580 | 36877.2 |
| hypothetical protein | SAMN04488505_104314 | Not Available | Positive | 4635666 - 4637927 | 84942.8 |
| hypothetical protein | SAMN04488505_104315 | Not Available | Positive | 4638034 - 4638582 | 18459.6 |
| hypothetical protein | SAMN04488505_104316 | Not Available | Positive | 4638679 - 4639308 | 24390.2 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04488505_104317 | Not Available | Positive | 4639345 - 4640328 | 35238.6 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488505_104318 | Not Available | Positive | 4640385 - 4641182 | 28652.0 |
| arac-type dna-binding protein | SAMN04488505_104319 | Not Available | Positive | 4641233 - 4642108 | 34373.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
