Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488505_104300 | Not Available | Negative | 4620275 - 4622065 | 66934.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_104301 | Not Available | Negative | 4622084 - 4625542 | 126807.0 |
| fecr family protein | SAMN04488505_104302 | Not Available | Negative | 4625779 - 4626948 | 43211.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_104303 | Not Available | Negative | 4627183 - 4627743 | 21436.0 |
| hypothetical protein | SAMN04488505_104304 | Not Available | Negative | 4627887 - 4628975 | 42147.4 |
| protein of unknown function | SAMN04488505_104305 | Not Available | Negative | 4629045 - 4630037 | 37731.0 |
| hypothetical protein | SAMN04488505_104306 | Not Available | Negative | 4630050 - 4630610 | 21227.2 |
| hypothetical protein | SAMN04488505_104307 | Not Available | Negative | 4630621 - 4631022 | 15707.8 |
| hypothetical protein | SAMN04488505_104308 | Not Available | Negative | 4631071 - 4631271 | 7890.72 |
| hypothetical protein | SAMN04488505_104309 | Not Available | Negative | 4631320 - 4631529 | 8010.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
