Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase (nadph) | SAMN04488505_104290 | Not Available | Negative | 4604349 - 4606013 | 61266.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_104291 | Not Available | Negative | 4606081 - 4607481 | 52842.8 |
| arac-type dna-binding protein | SAMN04488505_104292 | Not Available | Positive | 4607608 - 4608558 | 36344.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_104293 | Not Available | Positive | 4608893 - 4609471 | 20437.5 |
| Trna-gly | Not Available | Not Available | Positive | 4609733 - 4609805 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4609893 - 4609981 | Not Available |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_104296 | Not Available | Positive | 4610454 - 4612829 | 89051.6 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488505_104297 | Not Available | Negative | 4612916 - 4616644 | 134821.0 |
| hypothetical protein | SAMN04488505_104298 | Not Available | Negative | 4616676 - 4618097 | 52329.2 |
| putative alpha-1,2-mannosidase | SAMN04488505_104299 | Not Available | Negative | 4618129 - 4620198 | 78093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
