Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04488505_104280 | Not Available | Negative | 4592442 - 4592873 | 15633.9 |
| hypothetical protein | SAMN04488505_104281 | Not Available | Negative | 4593086 - 4593598 | 19754.1 |
| short chain enoyl-coa hydratase | SAMN04488505_104282 | Not Available | Negative | 4593684 - 4594463 | 28088.3 |
| protein of unknown function | SAMN04488505_104283 | Not Available | Negative | 4594472 - 4595623 | 44194.0 |
| yd repeat-containing protein | SAMN04488505_104284 | Not Available | Positive | 4595770 - 4596633 | 33237.4 |
| thiopeptide-type bacteriocin biosynthesis domain-containing protein | SAMN04488505_104285 | Not Available | Positive | 4596782 - 4599856 | 116344.0 |
| hypothetical protein | SAMN04488505_104286 | Not Available | Positive | 4599911 - 4600108 | 7234.59 |
| hypothetical protein | SAMN04488505_104287 | Not Available | Positive | 4600167 - 4600364 | 7289.63 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_104288 | Not Available | Negative | 4600780 - 4603248 | 88129.0 |
| ubiquitin-hydrolase zn-finger-containing protein | SAMN04488505_104289 | Not Available | Negative | 4603938 - 4604210 | 10318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
