Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylamine utilisation protein maue | SAMN04488505_104250 | Not Available | Positive | 4554727 - 4555182 | 16904.5 |
| hypothetical protein | SAMN04488505_104251 | Not Available | Positive | 4555379 - 4556077 | 26646.0 |
| alpha-glucosidase | SAMN04488505_104252 | Not Available | Positive | 4556304 - 4558265 | 73802.8 |
| uncharacterized conserved protein, duf885 familyt | SAMN04488505_104253 | Not Available | Positive | 4558426 - 4560186 | 66688.4 |
| protein of unknown function | SAMN04488505_104254 | Not Available | Negative | 4560453 - 4561319 | 32224.8 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04488505_104255 | Not Available | Negative | 4561733 - 4562131 | 14767.2 |
| uncharacterized membrane protein | SAMN04488505_104256 | Not Available | Positive | 4562384 - 4563124 | 26880.1 |
| hypothetical protein | SAMN04488505_104257 | Not Available | Positive | 4563130 - 4563747 | 22934.1 |
| gas vesicle protein | SAMN04488505_104258 | Not Available | Negative | 4563978 - 4564283 | 11246.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_104259 | Not Available | Negative | 4564414 - 4565688 | 47289.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
