Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104240 | Not Available | Positive | 4539110 - 4539367 | 8795.84 |
| hypothetical protein | SAMN04488505_104241 | Not Available | Positive | 4539538 - 4539786 | 9209.43 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488505_104242 | Not Available | Negative | 4539914 - 4542589 | 101334.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488505_104243 | Not Available | Negative | 4542672 - 4545077 | 90947.5 |
| hypothetical protein | SAMN04488505_104244 | Not Available | Negative | 4545149 - 4546093 | 37176.7 |
| susd family protein | SAMN04488505_104245 | Not Available | Negative | 4546114 - 4547604 | 55373.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_104246 | Not Available | Negative | 4547650 - 4550994 | 122771.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_104247 | Not Available | Positive | 4551452 - 4552009 | 21885.7 |
| fecr family protein | SAMN04488505_104248 | Not Available | Positive | 4552038 - 4553213 | 43505.7 |
| fecr family protein | SAMN04488505_104249 | Not Available | Positive | 4553552 - 4554658 | 41992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
